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Otp (Orthopedia homeobox)

Organism
Astyanax mexicanus (blind cavefish)
GO term(s)
Molecular Function: GO:0003677, GO:0043565
Cellular Component: GO:0005634
Biological Process: GO:0021522
Paralogs
Sequencing Methods
otpb: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006749267.1) annotated using gene prediction method: Gnomon, supported by EST evidence
Sequence >XM_007243938.1 Astyanax mexicanus otpb
ATGCTCTCTCACGCCGACCTCCTGGATGCTCGCCTCGGTGAGTTATCGCCACCCAACTCCGGTCTCCAGCTCCACTGGAT
GAAAGATGCAGCAGCAGAGCTGCTCGGCCACCGGGATGCTTTAAAGTGCAGACTCGGCGCCGCGGACGGCGGCCATCCAG
GCGACCTGAGCTCCGGCGCGGTCGACGCGGTCGAGGGGACCACCCTCCTCCCCGGGGAAGACATAAGCAATGGCGGATCA
AACCCCAACGGCTTGCAGCAGGTCGGCTCCAAAGAGCAGGACAAACAGCAGCAGCAGCAGAGCTCGGCTCAGGGCGGCGG
ACAGCAGAGCCAGAAACAGAAACGCCACAGGACCCGCTTTACTCCTGCGCAGCTTAATGAACTGGAGAGGAGCTTTGCAA
AAACCCATTACCCGGACATCTTCATGAGGGAAGAACTGGCGCTCAGGATCGGATTAACAGAGTCCCGCGTGCAGGTTTGG
TTCCAGAACCGCCGCGCCAAATGGAAGAAGCGCAAGAAGACCACCAACGTATTCCGCGCGCCCGGCACGCTGTTACCCAC
CCACAGTCTGCCGCAGTTCCCGTCCGCCGCGGCCGCCGCCGCCGCTATGGGAGACGGCCTGTGTTCCTTCCACGCCAACG
ACACGCGCTGGGCGGCTGCCGGAATGCCCGGGGTCTCTCAGTTGCAGTTGCCACCCTCTCTGGGCCGCCAACAGGCCATG
GCACAGTCTCTGTCGCAGTGCAGCCTGGGAGCAGGACCGCCCCCAAACTCCATGGGCCTTTCCAACAGCTTACAGTCCAA
TGGTTCCGGGCTACAGTCGCACCTGTACCAGCCCACCTTTCCCGGCATGGTGCCCGCATCCCTCTCCGGTCCGACCAACG
TGAGCGGCTCGCCCCAGCTGTGCAGCTCGCCGGACAGTGATATGTGGAGAGGGACCAGTATCGCTTCACTGCGCCGCAAA
GCGCTCGAGCACACGGTGTCAATGAGTTTCACCTAACGGGACAGACCGAAATTATACAAAAAAGAGGTCCTCGCAAAAAA
AGAATGAAAAAATGAAAAAGAAATAAAAAAACACCGAATAGTTCACCAACAGTACAGGAGCACTCAGGAGCTGAGGGTGG
GCTAACTATGGGGATTTATTGGAGCAATTGGCAGCCATTAAGGAAAAATGGAAAGTGGAAATTTCAGCAAAATCCATACC
ATTTTTGCACAACTGTTGAAAAAATCATTTGTTGACTTAACCGTTTTTAAAAGTGAGTGGCCTGGCAACCTTAAAATCAG
TCATAGAACTTCGAGTTACAAGTTAACAAACAAACAAATTGTTTGTTAACTTATGATTTACTTATCAAAATCACAACATT
TAAGGCATACAGGTGAACTTACAAACTTACCCATTTAAACTAATTTTTACAACGAGTTTTTTTGAACGGGTGGTTAACGT
ATTCTGGGCCATCTGGTAAATGCAGTACCTGTACAGTTTCTGCACTACAATCAATTGTAGTCTTTCCAAAAAGCAAGAAT
TTTGTCTATAAATAGGCTAAGACTATCTTTATTTTGTTGGAAAGTAAATGTAACAAGACCTTTATTGCAGATATATGTCC
CCTGTAGCAAAAACAGATGGCTCATAACATCACCATCCACCTTATTTTATTAATGTGTTGGAGAATTTCTGGTAATTTTC
GGTGTATTTTTCCATTGCCATTTATTTATTGATTTATTTACTTATTTATTAATTTATTTATTCAAACGTATTTATTGTTT
TTCTTCTTGCGTGTGTTCCTTCCTAGTAAAAGAACAGCCACGCATCCGGTGAAATTATGTCATTGATCAGACTACTAAGG
TTGATATTTGTTTAAGGAATCCCCGTGTACTGCATGCCACGATTGGTTTAAAGCATGGGGCACATGTGGGTTGGTTCTCA
CCGTTTTGTACAGGCGAGTATGATGTATTATGAGCAGGTTCTCCAAGAATCCGGTTCAGCTGCATGTCCATTGGCGAGGA
GCACCGAGGGGAGTTGACATAAAGCAAAATGAACTTGACTAGGATGTTCGTGTAGATAAAAAGCATTCTTGTTACCTGCT
GGTCTGTTTGTGATATGTTTTGACTTAC
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Organism

GO term(s)

Gene Expression

Gene Structure

Possible Primers

Phylogeny (Gene Tree)

Synteny

Genomic Map Locations

Paralogs

Sequencing Methods

Citations

Sequence

Gene Domains

Molecular Markers


Data input by E. Kaitetzidou
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