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FABP2 or IFABP (Fatty acid binding protein 2 or Intestinal fatty acid binding protein)

Organism
Xiphophorus maculatus (Platyfish)
GO term(s)
Molecular Function: GO: 0005215, GO: 0008289
Biological Process: GO: 0006810
Phylogeny
Genomic Map Locations
fabp2a
JH556843.1

fabp2b
JH557230.1
Paralogs
Sequencing Methods
fabp2a: NCBI: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004088019.1) annotated using gene prediction method: Gnomon, supported by EST evidence.

fabp2b: NCBI: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004088019.1) annotated using gene prediction method: Gnomon, supported by EST evidence.
Citations
  • Kaitetzidou E, Chatzifotis S, Antonopoulou E, Sarropoulou E.(2015) Identification,Phylogeny, and Function of fabp2 Paralogs in Two Non-Model Teleost Fish Species. Marine Biotechnology (NY). Oct;17(5):663-77. doi: 10.1007/s10126-015-9648-6. 2015 Aug 14.
  • The present information was produced within the Project ANnOTATE. Please cite aslo the website Fish-it.org
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    Sequence >XM_005807140.1 Xiphophorus maculatus fabp2a
    TTTAAACGGCCACATCATCACGCAGATGACGAGATAAGAGCGTACGCAGCTTAAAAGGAGCGCCGCACTCGCAGTAGGAC
    GGTCCTTTCTGCACAGTGGTTCAGCTCGCCTCAAGCAGTCAACATGACCTTCAACGGCACCTGGAAGGTGGATCGCAATG
    AAAACTATGAGAAGTTTATGGAACAAATGGGAGTAAACATGGTGAAGAGGAAGCTGGCCTCTCATGACAACCTGAAGATC
    ACCATCGAACAGACTGGAGACAAGTTTCATGTGAAGGAGAGCAGCAATTTCCGCAACATTGAAATAAACTTCACCCTGGG
    AGTCAACTTTGAGTACAGCCTGGCAGATGGAACACAACTATCAGGTGCCTGGACCATGGAGGGTGACACTCTTAAGGGGG
    TTTTCAACAGGAAGGACAACGGAAAACCGCTGACAACAGTCAGAACCATCCAAGGAGACGAACTCGTTCAGACCTACAAC
    TACGAAGGTGTGGATGCAAAGAGGATTTTCAAGAGAAGTTAGACCCGTCTTCTTTACTAAACTAAGTGAATTATGAAATC
    ATGTACAGTATTGTGTTGAACTGTCACATACATTCAAAAGTGCCAGATTTGTGATGCATTTTTATACCTGCATTAATAAA
    ATTAGAACAGCCGG
    Send to
    		or

    >XM_005813397.1 Xiphophorus maculatus fabp2b
    GGTGAGGGTGAGAGTGGAGGGTGGGAGTTGACAGCGACATGGGGATGGGGTGGGTATAAATGAGGGCCAGTGGGCATTCT
    CAGTCACACGGTTGTCCCCAGTGCCTTGTAACCAGCAGAGACGCTTGCAGCCATGGCTTTCAATGGGACCTGGAAGATTG
    ACCGCAATGAAAACTACGACAAGTTCATGGAGCAGCTGGGTGTCAACGTGGTGAAACGCAAGCTGGGTGAGCACGACAAC
    CTGAAGCTCACTTTTGAGCAAAATGGGGACAAGTTTCACATCAAAGAGTCCAGCACGTTCCGCACCAAAGAGATCGACTT
    CACCCTGGGCGTTCAGTTTGACTACTCTATGGCTGATGGAACCGACCTCGTAGGCACATGGGTGCTAGAGGGTGATACGC
    TGAAAGGGACTTTCAACAGGAAAGATAACAACAAGCTCCTGATCACCACAAGATCACTGGTTGGAGGAGAGCTTGTGCAG
    AGTTACAGCTATGAAGGCGTGGACGCAAAACGAATTTTCAAGAAGCAGTAACCAGGATCCAGCTGTTTATACTTGTACTT
    TTATATAGCTCACACAACTTTCTTTTCATCTTAACATTAGAGAACAACCAACCCTAAGGTGTATTCTCAACTCATTCATT
    TTATCTACCTGAAAATGTTTTTATATATATGTACAAATGCTTTTGGGGATGAATCATTGTAAAGGTGCTGTACTGCCAAT
    ACTTGAGTGAAACAATAAACAGAAAGGTGTTGCCCCCTGACTTGACAACTGATGACCTTGACAGACACATTTTGTACTCC
    GTGTCCAGTTCTCAGGCCAGGTCAGGAAGTCTAAATAAAGGGAGCTAAAAGAGCTGTTCCAACTGCAAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by Elisavet Kaitetzidou
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