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PPAR-alpha (Peroxisome proliferator-activated receptor alpha )

Organism
Oryzias latipes (Medaka)
Phylogeny
Genomic Map Locations
PPAR-alpha1
Med_Chr.6

PPAR-alpha2
Med_Chr.23
Paralogs
Sequencing Methods
PPAR-alpha1: Downloaded from Ensembl database

PPAR-alpha2: Sanger sequencing
Citations
  • Kondo H., Misaki R., Watabe S. (2010). Transcriptional activities of medaka Oryzias latipes peroxisome proliferator-activated receptors and their gene expression profiles at different temperatures. Fisheries Science 76(1):167-175. doi:10.1007/s12562-009-0193-y.
  • Fish-it.org
    		•
    Sequence >ENSORLT00000002999 Oryzias latipes PPAR-alpha1
    TCTTCCTCCTCCTCCCTCAATCTTGAGTGTCGGGTGTGTGCTGACCGCGCATCAGGCTACCACTATGGAGTTCATGCCTG
    CGAGGGTTGCAAGGGTTTCTTTAGGCGGACCATCCGCCTGAAGCTAGAGTATGACAAGTGTGAGCGTCGCTGCAAGATCC
    AAAAAAAGAACCGCAACAAGTGCCAATACTGCCGCTTCCAAAAGTGCCTGGCAGTGGGCATGTCCCACAATGCCATTCGA
    TTCGGCAGGATGCCTCAGTCGGAGAAGCTGAAGCTGAAGGCGGAGATGGTGGTAGGTGAGCGAGAGGTGGAGGATCCCCA
    GCTGGCTGATCAGAAAAGCCTGGCCAAGCAGATTTATGACGCCTACCTCAAGAACTTCAACATGACCAAGGCCAAGGCTC
    GGACCGTTCTCACGGGCAAGACCAGCACCCCTCCTTTCGTCATTCACGACATGGAAACGCTGCAGCGGGCAGAGCAGACG
    CTGGTGGCCAAGATGGTGGGCTCTACCGGCGCGCTGAAGGACCGCGAGGCCGAAGTCCGTATTTTCCACTGCTGCCAGTG
    CACGTCGGTGGAGACCGTCACGGAGCTCACCGAGTTCGCCAAATCCGTGCCGGGCTTTGCCGCCCTGGACCTTAACGATC
    AGGTGACTCTTTTGAAGTACGGCGTGTACGAAGCTCTCTTTGCCCTGCTGGCCTCCAGCATGAACAAGGATGGGCTCCTC
    GTGGCGTACGGCTCGGGCTTCATCACCCGGGAGTTCCTGAAAAGCCTGCGCCGACCGTTCAGCGACATGATGGAGCCCAA
    ATTCCAGTTTGCCATGAAGTTTAATGCGCTGGAGCTGGACGACAGCGACCTGGCTTTGTTCGTAGCCACCATCATCTGCT
    GTGGAGACCGGCCTGGCCTGGTGAATGTGGCGCACATCGATGCAATGCAGGAGAACATCGTGAAGGTCCTGCGGCTCCAC
    CTGCTGGGCAACCACCCCGACGACGCCTTCCTGTTCCCCAAGCTGCTGCAGAAACTGGCTGACCTCCGGCAGCTGGTCAC
    GGAGCATGCTCAGCTGGTGCAGGAGATCAAAAAGACAGAGGACACGTCGCTGCACCCGCTGCTACAGGAGATCTACCGAG
    ACATGTACTGA
    Send to
    		or

    >AB469411.1/ENSORLT00000013917 Oryzias latipes Peroxisome proliferator-activated receptor alpha1
    ATGGCGGCGGAACTGTACAGCCCCCCGTCCCCACTGGGAGATTCCCTCCTGGACAGTCCTCTGTGTGGAGACTTGATCGA
    GGATCTCCGTAAGATCTCTGCGTCGATAGGCGACAACTCGCTGGAATTCGACTTCCCGGAGTGCCAGAGCAACGACTCCG
    GGCCCAAAAGCTCCGTTATGCCGGCTGTAGACCCCTTAACTCCAGCCTCCAGTCCTTCACCAGAGGTGTGTGGAGCGGCC
    CCGGCAGCAGAGGACAGCGTCGGGCCCCTCAGCCTGGAGTGTCGCGTGTGCTCAGACCGAGCTTCAGGGTTCCACTATGG
    CGTGCACGCGTGTGAAGGCTGCAAGGGTTTCTTTAGAAGAACCATCAGGCTGAAGCTGGAGTACAACAAATGTGAACGCA
    ACTGTAAGATCCAGAAGAAGAACCGCAACAAGTGCCAATACTGCAGGTTCAACAAGTGTCTGATTGTGGGGATGTCCCAC
    AACGCCATCCGCTTCGGTCGCATGCCGCATGCAGAGAAGCTGAAGCTGAAGGAGGAAAGCAAGGTGGCAGAAAAGGAAGT
    TGAAAGCTGCATGGAGGGAGACGGTAAGACTCTGGTCAGGCAGATTCACGACGCCTACATGAAGAGCTTCACCATGAACA
    AGGCAAAGGCGCGGCTCATTCTGACCGGAAAGACAAGCGAACCGCCTTTTATTATCCACGACATGGACACGTTTCAGCTA
    GCTGAGAGGACGCTAGCTGCCTACATGGCCCACATGGTAAAAGGTGAGCGTTTGGAGTCAGAAAGCGAGCTTCGGGTTGA
    ACACGTGACTCCAGCCGGGGAGTCTGAGGAGCTCCAGCAGAGGGAGGCCGAAGCCAGACTGTTCCACTGCTGCCAGAGCA
    CGTCGGTGGAGACGGTCACCGAGCTGACGGAGTTCGCCAAGGCCATGCCAGACTTCCAGACCCTGGATTTAAACGATCAG
    GTGACCCTTCTGAAATATGCGGTCCACGAAGCGCTTTTCACCCTTTTGGCGTCCTGTATGAACAAAGATGGTCTCCTAGT
    GGCTCGAGGAAGAGGCTTTATCACACGCGAGTTCCTAAAGAGTCTCCGACGACCGTTTAGCGACATGATGGAGCCAAAGT
    TCCAGTTTGCGACGCGCTTCAACTCAATGGACTTGGACGACAGTGACCTGGCGCTTTTCGTGGCCGCCATCATTTGCTGT
    GGAGACCGTCCAGGTCTGGTGGACATACCGGTGGTGGAGCGGCTGCAGGAGAGCATCATTCAGGCGTTGCGGCACCACCT
    GCTGGCCAATCACCCCGACGACACTTTCCTGTTCCCCCGACTGCTGCAGAAGCTGGCTGACCTCAGGGAGCTCGTCACAG
    AGCACGCGCAGCTCATTCAGGAAATCAAAACACTAGAGGACACATCGCTGCACCCCCTCCTGCAAGAAATATACAAAGAC
    ATGTACTGA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by M.Iliopoulou E.Sarropoulou
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