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otx5 (Homeobox Protein otx5)

Organism
Oreochromis niloticus (Tilapia)
Phylogeny
Genomic Map Locations
otx5-like-a
LG10

otx5-like-b
LG14
Paralogs
otx5-like-a,
XM_003449797.3
otx5-like-b
XM_003449302.3
Sequencing Methods
otx5-like-a: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_167458.1) annotated using gene prediction method: Gnomon,supported by mRNA and EST evidence.

otx5-like-b: Not available
Citations
  • www.fish-it.org.
    		•
    Sequence >XM_003449797.3 Oreochromis niloticus homeobox protein otx5-like-a
    ATGATGTCCTACATAAAGCAACCCCATTACACCATGAACGGGTTAAACGTGCCTGCCCCTGGAATGGATGTGCTTCACAC
    AACCGTCGCTTATCCACCCACTCCCCGGAAGCAGCGCAGGGAGCGCACCACCTTCACCCGCACACAGCTGGACATCCTGG
    AGGCGCTCTTCTCAAAGACCCGCTACCCAGACATCTTCATGAGAGAGGAAGTGGCCCTCAAGATCAACCTGCCTGAGTCA
    CGTGTCCAGGTTTGGTTTAAAAACCGCCGTGCCAAGTGCCGCCAGCAGCAGCAGCAGAGCAGCGGCCAGTCCAAGCCCCG
    GCCTCCCAAAAAGAAGGCCTCGCCAGCGCAGGAGCCTAGCATTCCTGATCCCGTTCCTAACCCATCTGGCTCATTCAGCC
    CCTCCTCAGCCCAGTCGGGCCCCAGCCTGGCCCCGAGCTCCAGCACTGGAAACACTGCTGTGTCCATCTGGAGCCCAGCC
    ATCTCACCCCTGCCAGACCCCTTGGCCTCCTCCTCGGCACCCTGCATGCAGCGGCCCTCACCTTACCCTATGAGCTATGG
    CCAGCCGTCAGCCTACACCCAGGGCTATGCCAGCACAACCTCCTACTTCACTGGCCTGGACTGCAGCGCCTATCTGTCCC
    CCATGCATTCACAGTTGTCAGGCACCGGAGGTGCTCTCAGCCCCATTGCTGTGCCCTCTATGGGGGGCTCCCTAAGCCAG
    TCCCCAGCATCTCTGTCTTCACAGGGCTACAGCACTGCCTCTTCCCTGGGCTTCACCTCTGTCGACTGCCTGGACTACAA
    GGACCAGCAGGCCTGGAAGCTGGGCTTCACCACAATGGATTGCCTGGATCACAAGGACCAAAACTCCTGGAAGTTCCAGG
    TTCTCTAG
    Send to
    		or

    >XM_003449302.3 Oreochromis niloticus otx5-like-b
    ATGATGTCCTACATTAAGCAACCCCATTACGCCGTGAACGGGTTAACGCTGTCCGGCCCGGGCATGGATCTGCTCCACAC
    CGCCGCCGTTGGATATCCCAGCACCCCGCGTAAACAGCGTCGGGAGCGCACGACTTTCACGCGTGCGCAGCTGGACATCC
    TGGAGGCTCTTTTTGCCAAAACACGCTACCCAGACATCTTCATGAGGGAGGAAGTGGCACTCAAGATCAACCTGCCTGAG
    TCCAGAGTCCAGGTCTGGTTCAAAAACCGTCGTGCCAAGTGCCGCCAGCAGCAGCAACAGAGCACAGGCCAGTCCAAACC
    ACGGCCCCCTAAAAAGAAGGCATCCCCTGCTCGTGAGTCCAACACCGAGGCCAGTGCCAACCCCACCAACGGTCCCTACA
    GCCCACCTCCCCCTCCTCCAGGCACCGCCATCACCCCCAGTTCCAGCTCTGCTAGTGCCACAGTGTCCATCTGGAGCCCA
    GCCTCAATCTCTCCGCTGCCAGACCCCCTGTCTGCTTCCACCACCCCATGCATGCAGCGTACTACCACCTACCCCATGAC
    CTACACCCAGGCCCCAGCCTACAGCCAGAGCTACGCAGGCTCCTCCTCCTACTTCACTGGCCTGGACTGTAGCTCCTACC
    TGTCTCCAATGCACCCACAGCTGTCGGGGACCGGAGGGGCCCTGAGCCCTATCACAGCCTCCTCTATGGGCGGGCCCCTA
    AGCCAGTCCCCAGCCTCACTGTCCTCCCAGGGCTACACAGCCGCCTCACTGGGCTTTGGAGCCGTCGACTGTCTAGACTA
    CAAAGACCAAACTGCCTGGAAGCTCAATTTCAATGCCGCTGACTGTCTGGACTACAAAGACCAGAACTCCTGGAAGTTCC
    AGGTCTTGTAA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

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    Data input by Elena Sarropoulou
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