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MyoD (Myoblast determination protein)

Organism
Tetraodon nigroviridis (Tetraodon)
Phylogeny
Genomic Map Locations
MyOD-1
TN_Chr.13

MyoD-2
TN_Chr.5
Paralogs
Sequencing Methods
MyOD-1: Downloaded from Ensembl

MyoD-2: Not available
Citations
  • Macqueen DJ., Johnston IA. (2008). An update on MyoD evolution in teleosts and a proposed consensus nomenclature to accommodate the tetraploidization of different vertebrate genomes. PLoS ONE 3(2):E1567. doi:10.1371/journal.pone.0001567.
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    Sequence >ENSTNIT00000001883_AY616520.1 Tetraodon nigroviridis MyoD-1
    ATGGAGCTCTCGGAGATCTCCTTCTCCATCCCAGCCGCTGATGACTTCTATGACGACCCCTGTTTCAGCACCTCTGACAT
    GCACTTTTTTGAGGACCTGGACCCCCGCCTTGTCCACACGAGCCTGCTGAAGCCAGATGACTGTTGCTCCTCATCCTCAC
    TCTCCCCTTCGTCTTCTTCCTCGTCTCCATCCTCCCTCCAGCACCACCATCACCACGCTGAAGCGGAGGACGACGAGCAC
    GTCCGTGCACCCAGCGGGCACCACCAGGCGGGTCGCTGCCTCCTCTGGGCCTGCAAGGCCTGCAAACGGAAGACCACCAA
    CGCGGACCGGCGGAAGGCGGCGACGCTGCGTGAGCGGCGGCGCCTCAGCAAAGTCAACGAGGCCTTCGAGACCCTGAAGC
    GCTGCACCAGCGCCAACCCCAACCAGCGGCTGCCCAAAGTGGAGATCCTGAGGAACGCCATCAGCTACATCGAGTCCCTG
    CAGGCGCTGCTCCGAGGCGGCCAGGACGAGGCCTTCTACCCGGTGCTGGAGCACTACAGCGGGGACTCGGACGCGTCCAG
    CCCCCGCTCCAACTGCTCCGACGGCATGACGGATTTTAATGGTCCTACCTGTCAATCAAGCAGAAGAGGAAGTTATGACA
    GCAGCTATCTGTCACAAACTCCAAACGGTGAGAAAAATGCTGATCGGACAATTTTCCCTGAGAAAAGTTTGTCAAATAAT
    TGTTGTTATAGATTTCTGGTCGCAGGCAGCCTGAAGGCGGAGCGCAACTCCAGTCTGGACTGTCTGTCCAGCATCGTGGA
    GCGGATCTCCACGGACACCAGCAGCGGGCCGCTCCCCGCAGAGGGCCGCGCCTCTCCGGGGCCCGTCCTGGCCTCCCCCC
    CGCAGAGCAGCCGGGACCCAAACCTGATCTATCAGGTTCTTTAG
    Send to
    		or

    >ENSTNIT00000022212 Tetraodon nigroviridis MyoD-2
    ATGGATCTGTCCGAGCTGGTCTTCCCCCTCTCGGCCGACGACCTCTACGATGACCCCTGCTTCAGCAGCGGAGACCTGAA
    CTTCTTCGACGACCTGGACGCTCGCCTCCTGCTGAAGCCGGACGGCCACCAGCGCCTCCATCACCACGTTCCCAGCGCCG
    AGGAGGAGCTGGAGGAGGAGGCGGGGGTGGAGGAGCACGTGAGGGCCCCGGGGGGCCTCCACCAGGCGGGCCGCTGCCTG
    CTCTGGGCCTGCAAGGCCGACAAGAGGAAGACCACCCACGCCGACCGGCGCAAGGCGGCCACCATGCGGGAGCGGCGGCG
    GCTGAGCAAAGTCAACGACGCCTTCGAGACGCTGAAGCGATGCACCGCCTCCAACCCCAACCAGCGGCTGGCCAAGGTGG
    AGATCCTGCGCAACGCCATCAGCTACATCGAGTCCCTGCAGGCGCTGCTCAGGACTTCGGGCCAGGACCAGAGCTTCTAC
    CCGCCGCTGGAGCCCTACGGCGCCGACTCGGACGCCTCCAGCCCGCGGTCCAGCTGCTCGGACGGCGCGATGGATTTCGT
    TTCTCCGTGTTTGACCTCCACCGAAATGAAGAGATCAAAGAAAATCATCCAGACGACGGCAGATCCCAGCAGCAAACAGT
    GTCTGGTTTCCAGTTTGGAGTGTTTGTCCAGCATCGTGGAGCGGATCAGCACAGACCCCAGGGTGGGGGCCCCCGTGGGC
    GACAGCGTGGTCCCCCGGGGCCCCGGATCCCCTCGCAGCAGCCCGGCAGGGATCTACGAGCCGCTCTGA
    Send to
    		or



    Organism

    GO term(s)

    Gene Expression

    Gene Structure

    Possible Primers

    Phylogeny (Gene Tree)

    Synteny

    Genomic Map Locations

    Paralogs

    Sequencing Methods

    Citations

    Sequence

    Gene Domains

    Molecular Markers


    Data input by E.Sarropoulou
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